Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved

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Protection of CpG islands from DNA methylation is DNA-encoded and evolutionarily conserved

DNA methylation is a repressive epigenetic modification that covers vertebrate genomes. Regions known as CpG islands (CGIs), which are refractory to DNA methylation, are often associated with gene promoters and play central roles in gene regulation. Yet how CGIs in their normal genomic context evade the DNA methylation machinery and whether these mechanisms are evolutionarily conserved remains ...

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DNA Methyltransferases and Methylation of CpG islands

DNA methylation is a critical mechanism of epigenetic modification involved in gene expression programming, that can promote the development of several cancers, including breast cancer. The methylation of CpG islands by DNA methyltransferases is reversible and has been shown to modify the transcriptional activity of key proliferation genes or transcription factors involved in suppression or pro...

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Semiautomatic detection of DNA methylation at CpG islands.

DNA methylation of genes is increasingly recognized as one of the major mechanisms of gene inactivation that may contribute to the development of human cancer by silencing genes that suppress tumor growth (1). In recent years, methylation-specific PCR (MSP) of bisulfite-modified genomic DNA (gDNA) has been used as a standard method to detect DNA methylation changes at CpG islands (2). MSP is a ...

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MIRA-seq for DNA methylation analysis of CpG islands

AIM To develop a reliable method for whole genome analysis of DNA methylation. MATERIALS & METHODS Genome-scale analysis of DNA methylation includes affinity-based approaches such as enrichment using methyl-CpG-binding proteins. One of these methods, the methylated-CpG island recovery assay (MIRA), is based on the high affinity of the MBD2b-MBD3L1 complex for CpG-methylated DNA. Here we provi...

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ژورنال

عنوان ژورنال: Nucleic Acids Research

سال: 2016

ISSN: 0305-1048,1362-4962

DOI: 10.1093/nar/gkw258